Sequencing data
Based on an exhaustive literature search on PubMed, publications
describing new P. vivax genomes were identified until October
2022, and the corresponding sequencing data was downloaded from the
Sequencing Read Archive (SRA) of NCBI. Additionally, a set of newP. vivax genome sequencing data produced in the context of this
study, were added to the list of genomes (n=163, originating from Peru,
Brazil, Vietnam, Eritrea, Ethiopia, Burundi, Mauritania, Somalia, and
Sudan), which have been described in more detail in . Details of allP. vivax genomes used in this study can be found in Supplementary
Table 1, including metadata and accession numbers. The downloaded
genomes contained monkey-adapted P. vivax strains that were
removed from population genetic analyses.