The SARS-CoV-2 (Severe Acute Respiratory Syndrome Coronavirus 2) has caused an unprecedented pandemic in human history. To date, more than 6.5 million lives have been lost to COVID-19 (coronavirus disease 2019). Following widespread efforts for COVID-19 vaccination in Brazil, there has been a drastic reduction in COVID-19 deaths, which was particularly evident in the city of Botucatu, SP, Brazil, after a campaign to a mass vaccination. Our objective was to assess the temporal and epidemiological spread of Variants of Concern (VOC) of SARS-CoV-2 in the four weeks preceding the massive vaccination campaign in the municipality. After randomizing 400 samples, Next-Generation Sequencing was used to produce sequences and determine the variants. Among high-quality sequences, 98.4% belonged to the VOC Gamma, with P.1 and P.1.14 being the most prevalent lineages. P.1 was more frequent in both men and women, and in younger individuals and adults (0-59 years) compared to P.1.14. There was no correlation between the variants and the presence of comorbidities or between them and moderate to severe clinical cases of COVID-19 or death. However, P.1 was more frequent than P.1.14 in people with mild forms of the disease and in those who exhibited symptoms. In the phylogenetic analyses, a small cluster of 9 P.1.14 samples containing mutations in ORF1a: M584V and A3620V was observed, which had not been found in any Gamma sequences to date. The importance of genomic surveillance of SARS-CoV-2 is evident in assisting public health decision-making and the management of COVID-19 and other diseases.

Marna Sakalem

and 3 more

An impressive percentage of biomedical knowledge and advances were achieved through animal research and cell culture investigations. For drug testing and disease researches, both animal models and preclinical trials with cell cultures are extremely important, but they present some limitations, such as ethical concern and lack of representatively of human tissues and organs. Most cells are currently cultured using two-dimensional (2D) methods, but new and improved methods that implement three-dimensional (3D) cell culture techniques suggest convincing evidence that much more advanced experiments can be performed with more complex information. The environment and cell types in 3D culture can be manipulated to mimic tissue in vivo and provide more accurate data on cell-to-cell interactions; the cultivation techniques are based on a scaffold, which can be based on hydrogel or polymeric material, in addition there are techniques without using scaffold, such as suspended microplates, magnetic levitation and microplates for spheroids with ultra-low fixation coating. Even though 3D culturing is clearly incapable of replacing other current research types, they might continue to replace some unnecessary animal experimentation, as well as improve monolayer cultures. It is not even recommended or expected that 3D models substitute all other research types, but in regard to animal testing, they come in hand for the 3 Rs: Reduction, Refinement, Replacement. In this aspect, 3D culture emerges as valuable alternatives to the investigation of functional, biochemical and molecular aspects of human pathologies.