Isolate name
Location of samples collection
Year
Source of inflow or outflow of pigs to markets
CVR
Number of repeats
Accession Number
Reference
Nig_DWK286
Live pig market Dawaki, Plateau State
2019
Both inflow and outflow
ABNAAAACBNAAAACBNAAAACBNAAAACBNAAAACBNAFA
41
This study
Nig_NUM424 Live pig market Numan Adamawa Sate 2019 NA ABNAAAACBNAAAAAACAACBNAAAAACBNAFA 33 This study
Nig_KAF199 Live pig market Katsit Kafanchan Kaduna State 2019 NA ABNAAAACBNAAACBNAAAACBNAFA 26 This study
Nig_KAF307 Live pig market Katsit Kafanchan Kaduna State 2020 NA ABNAAAACBNAAAACBNAAAFA 22 This study
Nig_KAF194 Live pig market Katsit Kafanchan Kaduna State 2019 NA ABNAAAACBNAAAACBNAFA 20 This study
Nig_KAF163 Live pig market Katsit Kafanchan Kaduna State 2019 NA ABNABNAAAAAACBNAFA 18 This study
Nig_KAF253 Live pig market Katsit Kafanchan Kaduna State 2020 NA ABNAAAACBNAFA 13 This study
Nig_PDM288T
Live pig market Pandam, Plateau State
2020
NA
ABNAAAACBNAFA
13
This study
Nig_KAF41 Live pig market Katsit Kafanchan Kaduna State 2019 NA BNDBNDBNAA 10 This study
Nig_KAF164 Live pig market Katsit Kafanchan Kaduna State 2020 NA BNDBNDBNAA 10 This study
Katsit fetus 2 Live pig market Katsit Kafanchan Kaduna State 2005 NA ABNAAAACBNAAAACBNAFA 20a GQ427185 (Owolodun, , et al., 2010)
Nigeria_ABD13KPM2_A Live pig market Katsit Kafanchan Kaduna State 2012 NA ABNAAAAACBNABTDBNAFA 20b (Luka et al., 2016)
Nig11_KAF_14 Live pig market Katsit Kafanchan Kaduna State 2014 NA ABNABNAAAAACBNA 15 KT961377 (Luka et al., 2016)
Nig13_KAF_14 Live pig market Katsit Kafanchan Kaduna State 2014 NA ABNABNAAAAACBNAFA 17a KT961366 (Luka et al., 2016)
Nig12_KAF_14 Live pig market Katsit Kafanchan Kaduna State 2014 NA ABNAAAACBNAAAACBNAAAACBNAAAACBNAAAACBNAAAACBNAFA 48 KT961378 (Luka et al., 2016)
PL03
K-Vom, Plateau State Nigeria
2016
Inflow
ABNABNAAAAACBNA
Tet-15
Adedeji et al 2021
Nigeria_CDP11SP Delta/Ughelli 2007 Outflow ABNABNAAAAACBNAFA 17a KT150931
Nig29_LGTT5_15 Plateau/Langtang 2015 Inflow ABNAAAACAAACBNAFA 17b KT961375
Nig6_JS10_13 Plateau/Jos 2013 Inflow ABNAAAACBNAAAACBNAAAACBNAAAACBNAAAACBNAAAACBNAFA 48 KT961364
NIG_BNGBT2
Benue State Nigeria
2009
Outflow
ABNAAAAACBNABTDBNAFA
20b
KT150924
Luka et al,, 2015
NIG_ABDPOSASF5
Jos Plateau State Nigeria
2011
Inflow
ABNAAAAACBNABTDBNAFA
20b
KT150923
Luka et al,, 2015
Makurdi pig Benue, Nigeria 2005 Outflow ABNAAAACBNAAAAACBNAFA 21 GQ427186 (Owolodun, et al., 2010)
Udi pig 1 Enugu State Nigeria 2003 Outflow ABNAAAACBNAAAACBNAAAACBNAFA 27 GQ427187 (Owolodun, Bastos, et al., 2010)
OJ pig 1 Edo 2006 Outflow ABNAAAAACBNAAAACBNAAAAACBNAFA 29 GQ427188 (Owolodun, Bastos, et al., 2010)
Nig 01 Lagos 2006 Outflow AAACBNAAAAAACBNAAAAAACBNAAAAB 30
CAM/89 Cameroon 1989 Inflow ABNAAAACBNAAAACBNAFA 20a AF513045
IC‐SP/2014/3 Ivory Coast 2014 NA ABNAAAAACBNABTDBNAFA 20b MH836365 (Luka et al., 2016)
Ben09/AGL1 Benin 2009 NA ABNAAAAACBNAAAAACBNAFA 22 (Alkhamis et al., 2018)
Tog09/P1 Togo 2009 NA ABNAAAAACBNAAAAACBNAFA Tet-22b (Alkhamis et al., 2018)