SSR Forward primer Reverse primer Amplicon Motif Annealing
name sequence (5’-3’) Tm sequence (5’-3’) Tm size (bp) Repeat Temperature
162 TGATGTGAAAAGAACACCCC 58.4 TGTGATTCCAGGGAGGAGTA 58.1 216 (ATTTG)n 62
1225 GGTCCCAATGACAAACAGTC 57.8 GTTGGGTTTGGTTCTTGTTG 58.0 183 (CCCAA)n 62
1792 AACTAGTCGGATCGAGCCTT 58.0 AATCACACAACTCCGCAAGT 58.2 174 (CCCAA)n 57
2656 AACCAAACCGCACTAAACTG 57.8 GCACAATAGAGAGGGCAAAA 58.0 277 (TGGTT)n 62
2895 GTCATAGCCATCCCTTACCC 58.3 TATTGCCCTGTTCTTCAGGA 58.3 267 (AGTTC)n 62
2916 GTGCCAAAACCAAAGTTGTC 58.1 CCTCTCAACACAGGTTGCTT 57.9 215 (ATTTT)n 62
3332 CATGTACCTCGTGCAATGAA 58.1 TTTAGCTTAGCAATCACGGG 58.1 203 (TGTTG)n 57
5417 AGTGTGCTAAGAATTTGGGC 57.0 ACCATCAATTGTGATCGGAG 58.4 203 (GATAT)n 62
5608 GAGGCAAAGGATAAGGTGGT 58.1 ACGAAGGGAAGAGAAAGGAA 58.0 249 (AGGGA)n 57
5726 GCAGCCAAGCCATTCTATTA 58.0 AGCCCTTCCATGGAGAATTT 59.9 223 (TTATT)n 62
8376 ATGGAGCTGAACTGAACCAA 58.3 TTGTACCAGAATGCCTGTCA 57.7 254 (CTGAA)n 62