Transmission links |
M. bovis genomes
|
SNP-distance |
Spoligotypes |
Link 1 (deer) |
TB005S5L and TB004S4L |
4 |
SB1401 |
Link 2 (deer) |
TB006S6L and TB007S7L |
4 |
SB1401 |
Link 3 (deer) |
TB10S10L andTB0076S7L |
10 |
SB1401 |
Link 4 (deer) |
TB004S4L and TB007S7L |
8 |
SB1401 |
Link 5 (cattle) |
ERR4450971 and ERR4450970 |
11 |
SB1135 |
Link 6 (cattle) |
ERR4450970 and ERR4450974 |
11 |
SB1135 |
Link 7 (cattle) |
ERR4450974 and ERR4450972 |
8 |
SB1135 |
Link 8 (cattle) |
ERR4450974 and ERR4450973 |
11 |
SB1135 |
Link 9 (cattle) |
ERR4451184 and ERR4451185 |
3 |
SB095 |
Link 10 (cattle) |
ERR4450923 and ERR4450920 |
7 |
SB1369 |
Link 11 (cattle) |
ERR4450923 and ERR4450922 |
10 |
SB1369 |
Link 12 (cattle) |
ERR4450923 and ERR4450924 |
10 |
SB1369 |
Link 13 (cattle) |
ERR4450919 and ERR4450923 |
9 |
SB1369 |
Link 14 (cattle) |
ERR4450919 and ERR4450925 |
11 |
SB1369,
SB0295 |
Link 15 (cattle) |
ERR4450932 and ERR4450928 |
10 |
SB0295 |
Link 16 (cattle) |
ERR4450934 and ERR4450927 |
7 |
SB0295 |
Link 17 (cattle) |
ERR4450932 and ERR4450926 |
11 |
SB0295 |
Link 18 (cattle) |
ERR4450932 and ERR4450929 |
8 |
SB0295 |
Link 19 (cattle) |
ERR4450929 and ERR4450930 |
7 |
SB0295,
SB2709 |
Link 20 (cattle) |
ERR4450953 and ERR4450944 |
12 |
SB1993 |
Link 21 (cattle) |
ERR4450944 and ERR4450948 |
6 |
SB1993,
SB2712 |
Link 22 (cattle) |
ERR4450944 and ERR4450949 |
5 |
SB1993 |
Link 23 (cattle) |
ERR4450955 and ERR4450941 |
6 |
SB0140 |
Link 24 (cattle) |
ERR4450941 and ERR4450940 |
6 |
SB0140 |
Link 25 (cattle) |
ERR4450955 and ERR4450954 |
7 |
SB0140 |
Link 26 (cattle) |
ERR4450938 and ERR4450937 |
12 |
SB1993 |
Link 27 (cattle) |
ERR4450962 and ERR4450950 |
9 |
SB1993,
SB0121 |
Link 28 (cattle) |
ERR4450969 and ERR4450964 |
6 |
SB0121 |
Link 29 (cattle) |
ERR4450964 and ERR4450966 |
9 |
SB0121,
SB1135 |
Link 30 (cattle) |
ERR4450969 and ERR4450968 |
7 |
SB0121 |
Link 31 (cattle) |
ERR4450969 and ERR4450965 |
9 |
SB0121 |
Link 32 (cattle) |
ERR4450965 and ERR4450961 |
11 |
SB0121 |