Quantifying vascular network characteristics
Binarized vascular images (exported via FIJI to .nrrd files) were
imported into 3Dslicer 29, 30 to quantify
vascular network characteristics. The VMTKmodule31, 32 of 3D slicer was used to extract a
network model from vasculature, and to provide automatic quantification.
More detailed procedures are described in Supplementary Methods.