Supplemental Tables & Figures
Table S1 The detailed information of each sample of goldfish (Carassius auratus ), including summary for genome resequencing data, individual genetic diversity, ROH detection and mitogenome
Table S2 The putative selective sweep regions identified between invasive and source populations
Table S3 Candidate genes obtained by annotation of SNPs within selective sweep regions
Table S4 The top 20 of enriched GO terms for candidate genes under selection in goldfish (Carassius auratus ) after invasion to the Tibet Plateau
Figure S1 The analysis of allele frequency distributions at biallelic variants clearly showed one Gaussian with 0.5 in diploids (a) and two Gaussians with 0.33 and 0.67 (b) in triploids.
Figure S2 The maximum-likelihood phylogenetic tree based on mitogenome sequences of all samples. The circles and triangles represented the diploid and triploid samples, respectively.
Figure S3 Neighbor-joining clustering of diploids (a) and triploids (b) based on pairwise genetic distances calculated from genomic LD-pruned SNPs.