References
Aeby, G. S., Ushijima,
B., Campbell, J. E., Jones, S., Williams, G. J., Meyer, J. L., Häse, C.,
& Paul, V. J. (2019). Pathogenesis of a tissue loss disease affecting
multiple species of corals along the Florida Reef Tract. Frontiers
in Marine Science, 6, 00678.
https://doi.org/10.3389/fmars.2019.00678
Aeby, G., Ushijima,
B., Bartels, E., Walter, C., Kuehl, J., Jones, S., & Paul, V. J.
(2021). Changing stony coral tissue loss disease dynamics through time
in Montastraea cavernosa. Frontiers in Marine Science,8, 699075. https://doi.org/10.3389/fmars.2021.699075
Aranda, M., Banaszak,
A. T., Bayer, T., Luyten, J. R., Medina, M., & Voolstra, C. R. (2011).
Differential sensitivity of coral larvae to natural levels of
ultraviolet radiation during the onset of larval competence.Molecular Ecology, 20(14), 2955–2972.
https://doi.org/10.1111/j.1365-294X.2011.05153.x
Becker, C. C., Brandt,
M., Miller, C. A., & Apprill, A. (2021). Microbial bioindicators of
stony coral tissue loss disease identified in corals and overlying
waters using a rapid field‐based sequencing approach.Environmental Microbiology, 24, 1166–1182.
https://doi.org/10.1111/1462-2920.15718
Chen, H., & Boutros,
P. C. (2011). VennDiagram: A package for the generation of
highly-customizable Venn and Euler diagrams in R. BMC
Bioinformatics, 12, 35. https://doi.org/10.1186/1471-2105-12-35
Combs, I. R.,
Studivan, M. S., Eckert, R. J., & Voss, J. D. (2021). Quantifying
impacts of stony coral tissue loss disease on corals in Southeast
Florida through surveys and 3D photogrammetry. PLoS ONE,16(6), e0252593. https://doi.org/10.1371/journal.pone.0252593
Connelly, M. T.,
McRae, C. J., Liu, P.-J., Martin, C. E., & Traylor-Knowles, N. (2022).
Antibiotics alter Pocillopora coral-Symbiodiniaceae-bacteria
interactions and cause microbial dysbiosis during heat stress.Frontiers in Marine Science, 8, 814124.
https://doi.org/10.3389/fmars.2021.814124
D’Arcy, M. S. (2019).
Cell death: A review of the major forms of apoptosis, necrosis and
autophagy. Cell Biology International, 43, 582–592.
https://doi.org/10.1002/cbin.11137
Davies, S. W., Ries,
J. B., Marchetti, A., & Castillo, K. D. (2018). Symbiodiniumfunctional diversity in the coral Siderastrea siderea is
influenced by thermal stress and reef environment, but not ocean
acidification. Frontiers in Marine Science, 5, 150.
https://doi.org/10.3389/fmars.2018.00150
Deutsch, J. M.,
Jaiyesimi, O. A., Pitts, K. A., Houk, J., Ushijima, B., Walker, B. K.,
Paul, V. J., & Garg, N. (2021). Metabolomics of healthy and stony coral
tissue loss disease affected Montastraea cavernosa corals.Frontiers in Marine Science, 8, 714778.
https://doi.org/10.3389/fmars.2021.714778
Deutsch, J. M.,
Mandelare-Ruiz, P., Yang, Y., Foster, G., Routhu, A., Houk, J., De La
Flor, Y. T., Ushijima, B., Meyer, J. L., Paul, V. J., & Garg, N.
(2022). Metabolomics approaches to dereplicate natural products from
coral-derived bioactive bacteria. Journal of Natural Products,85, 462–478. https://doi.org/10.1021/acs.jnatprod.1c01110
Dixon, G., Abbott, E.,
& Matz, M. V. (2020). Meta-analysis of the general coral stress
response: Acropora corals show opposing responses depending on
stress intensity. Molecular Ecology, 29, 2855–2870.
https://doi.org/10.1111/mec.15535
Dixon, G. B., Davies,
S. W., Aglyamova, G. A., Meyer, E., Bay, L. K., & Matz, M. V. (2015).
Genomic determinants of coral heat tolerance across latitudes.Science, 348, 1460–1462.
https://doi.org/10.1126/science.1261224
Doering, T., Wall, M.,
Putchim, L., Rattanawongwan, T., Schroeder, R., Hentschel, U., & Roik,
A. (2021). Towards enhancing coral heat tolerance: A “microbiome
transplantation” treatment using inoculations of homogenized coral
tissues. Microbiome, 9, 102.
https://doi.org/10.1186/s40168-021-01053-6
Emms, D. M., & Kelly,
S. (2015). OrthoFinder: Solving fundamental biases in whole genome
comparisons dramatically improves orthogroup inference accuracy.Genome Biology, 16, 157.
https://doi.org/10.1186/s13059-015-0721-2
Emms, D. M., & Kelly,
S. (2019). OrthoFinder: Phylogenetic orthology inference for comparative
genomics. Genome Biology, 20, 238.
https://doi.org/10.1186/s13059-019-1832-y
Forrester, G. E.,
Arton, L., Horton, A., Nickles, K., & Forrester, L. M. (2022).
Antibiotic treatment ameliorates the impact of stony coral tissue loss
disease (SCTLD) on coral communities. Frontiers in Marine
Science, 9, 859740. https://doi.org/10.3389/fmars.2022.859740
Fuess, L. E., Butler,
C. C., Brandt, M. E., & Mydlarz, L. D. (2020). Investigating the roles
of transforming growth factor-beta in immune response of Orbicella
faveolata, a scleractinian coral. Developmental and Comparative
Immunology, 107, 103639.
https://doi.org/10.1016/j.dci.2020.103639
Fuess, L. E., Pinzón
C, J. H., Weil, E., Grinshpon, R. D., & Mydlarz, L. D. (2017). Life or
death: Disease-tolerant coral species activate autophagy following
immune challenge. Proceedings of the Royal Society B: Biological
Sciences, 284, 20170771. https://doi.org/10.1098/rspb.2017.0771
Fuess, L. E., Pinzón
C., J. H., Weil, E., & Mydlarz, L. D. (2016). Associations between
transcriptional changes and protein phenotypes provide insights into
immune regulation in corals. Developmental and Comparative
Immunology, 62, 17–28.
https://doi.org/10.1016/j.dci.2016.04.017
González-Barrios, F.
J., & Álvarez-Filip, L. (2018). A framework for measuring coral
species-specific contribution to reef functioning in the Caribbean.Ecological Indicators, 95, 877–886.
https://doi.org/10.1016/j.ecolind.2018.08.038
Gordon, A., & Hannon,
G. (2010). Fastx-toolkit. FASTQ/A Short-Reads Preprocessing Tools
(Unpublished) Http://Hannonlab.Cshl.Edu/Fastx_toolkit, 5.
Griffin, D. W., Banks,
K., Gregg, K., Shedler, S., & Walker, B. K. (2020). Antibiotic
resistance in marine microbial communities proximal to a Florida sewage
outfall system. Antibiotics, 9, Article 3.
https://doi.org/10.3390/antibiotics9030118
Huerta-Cepas, J.,
Forslund, K., Coelho, L. P., Szklarczyk, D., Jensen, L. J., Von Mering,
C., & Bork, P. (2018). Fast genome-wide functional annotation through
orthology assignment by eggNOG-Mapper. Molecular Biology and
Evolution, 34, 2115–2122.
https://doi.org/10.1093/molbev/msx148
Huerta-Cepas, J.,
Szklarczyk, D., Forslund, K., Cook, H., Heller, D., Walter, M. C.,
Rattei, T., Mende, D. R., Sunagawa, S., Kuhn, M., Jensen, L. J., Von
Mering, C., & Bork, P. (2016). eggNOG 4.5: A hierarchical orthology
framework with improved functional annotations for eukaryotic,
prokaryotic and viral sequences. Nucleic Acids Research,44, D286–D293. https://doi.org/10.1093/nar/gkv1248
Jacquemot, L.,
Bettarel, Y., Monjol, J., Corre, E., Halary, S., Desnues, C., Bouvier,
T., Ferrier-Pagès, C., & Baudoux, A.-C. (2018). Therapeutic potential
of a new jumbo phage that infects Vibrio coralliilyticus, a
widespread coral pathogen. Frontiers in Microbiology, 9,
2501. https://doi.org/10.3389/fmicb.2018.02501
Johnston, M. A.,
Studivan, M. S., Enochs, I. C., Correa, A. M. S., Besemer, N., Eckert,
R. J., Edwards, K., Hannum, R., Hu, X., Nuttall, M., O’Connell, K.,
Palacio-Castro, A. M., Schmahl, G. P., Sturm, A. B., Ushijima, B., &
Voss, J. D. (2023). Coral disease outbreak at the remote Flower Garden
Banks, Gulf of Mexico. Frontiers in Marine Science, 10,
1111749. https://doi.org/10.3389/fmars.2023.1111749
Kassambara, A.,
Kosinski, M., & Biecek, P. (2021). Survminer: Drawing survival
curves using “ggplot2”. R package version 0.4.9.
Kauffmann, A.,
Gentleman, R., & Huber, W. (2009). arrayQualityMetrics—A
bioconductor package for quality assessment of microarray data.Bioinformatics, 25(3), 415–416.
https://doi.org/10.1093/bioinformatics/btn647
Kitchen, S. A.,
Crowder, C. M., Poole, A. Z., Weis, V. M., & Meyer, E. (2015). De
novo assembly and characterization of four anthozoan (Phylum Cnidaria)
transcriptomes. G3: Genes, Genomes, Genetics, 5,
2441–2452. https://doi.org/10.1534/g3.115.020164
Kolde, R. (2019).
Pheatmap: Pretty heatmaps. R package version 1.0.12.
Koval, G., Rivas, N.,
D’Alessandro, M., Hesley, D., Santos, R., & Lirman, D. (2020). Fish
predation hinders the success of coral restoration efforts using
fragmented massive corals. PeerJ, 8, e9978.
https://doi.org/10.7717/peerj.9978
Kramer, P. R., Roth,
L., & Lang, J. (2019). Map of Stony Coral Tissue Loss Disease
Outbreak in the Caribbean. Accessed 14 Oct 2022. ArcGIS Online.
www.agrra.org
Landsberg, J. H.,
Kiryu, Y., Peters, E. C., Wilson, P. W., Perry, N., Waters, Y., Maxwell,
K. E., Huebner, L. K., & Work, T. M. (2020). Stony coral tissue loss
disease in Florida is associated with disruption of host–zooxanthellae
physiology. Frontiers in Marine Science, 7, 576013.
https://doi.org/10.3389/fmars.2020.576013
Langfelder, P., &
Horvath, S. (2008). WGCNA: An R package for weighted
correlation network analysis. BMC Bioinformatics, 9, 559.
https://doi.org/10.1186/1471-2105-9-559
Langmead, B., &
Salzberg, S. L. (2012). Fast gapped-read alignment with Bowtie 2.Nature Methods, 9, 357–359.
https://doi.org/10.1038/nmeth.1923
Liu, S., Su, H., Pan,
Y.-F., & Xu, X.-R. (2020). Spatial and seasonal variations of
antibiotics and antibiotic resistance genes and ecological risks in the
coral reef regions adjacent to two typical islands in South China Sea.Marine Pollution Bulletin, 158, 111424.
https://doi.org/10.1016/j.marpolbul.2020.111424
Love, M. I., Huber,
W., & Anders, S. (2014). Moderated estimation of fold change and
dispersion for RNA-seq data with DESeq2. Genome Biology,15, 550–571. https://doi.org/10.1186/s13059-014-0550-8
MacKnight, N. J.,
Dimos, B. A., Beavers, K. M., Muller, E. M., Brandt, M. E., & Mydlarz,
L. D. (2022). Disease resistance in coral is mediated by distinct
adaptive and plastic gene expression profiles. Science Advances,8, eabo6153. https://doi.org/10.1126/sciadv.abo6153
Meiling, S. S.,
Muller, E. M., Lasseigne, D., Rossin, A., Veglia, A. J., MacKnight, N.,
Dimos, B., Huntley, N., Correa, A. M. S., Smith, T. B., Holstein, D. M.,
Mydlarz, L. D., Apprill, A., Brandt, M. E., & Neely, K. L. (2021).
Variable species responses to experimental stony coral tissue loss
disease (SCTLD) exposure. Frontiers in Marine Science, 8,
670829. https://doi.org/10.3389/fmars.2021.670829
Meyer, J. L.,
Castellanos-Gell, J., Aeby, G. S., Häse, C. C., Ushijima, B., & Paul,
V. J. (2019). Microbial community shifts associated with the ongoing
stony coral tissue loss disease outbreak on the Florida Reef Tract.Frontiers in Microbiology, 10, 2244.
https://doi.org/10.3389/fmicb.2019.02244
Mydlarz, L. D., &
Harvell, C. D. (2007). Peroxidase activity and inducibility in the sea
fan coral exposed to a fungal pathogen. Comparative Biochemistry
and Physiology Part A: Molecular & Integrative Physiology, 146,
54–62. https://doi.org/10.1016/j.cbpa.2006.09.005
Neely, K. L.,
Macaulay, K. A., Hower, E. K., & Dobler, M. A. (2020). Effectiveness of
topical antibiotics in treating corals affected by stony coral tissue
loss disease. PeerJ, 8, 9289.
https://doi.org/10.7717/peerj.9289
NOAA. (2018). Stony
Coral Tissue Loss Disease Case Definition. NOAA, Silver Spring,
MD, 10.
Oksanen, J., Blanchet,
F. G., Kindt, R., Legendre, P., Minchin, P. R., O’Hara, R., Simpson, G.,
Solymos, P., Stevens, M., & Wagner, H. (2015). Vegan: Community
ecology package. R package version 2.0-10.
Palmer, C. V. (2018).
Warmer water affects immunity of a tolerant reef coral. Frontiers
in Marine Science, 5, 253.
https://doi.org/10.3389/fmars.2018.00253
Peixoto, R. S., Sweet,
M., Villela, H. D. M., Cardoso, P., Thomas, T., Voolstra, C. R., Høj,
L., & Bourne, D. G. (2021). Coral probiotics: Premise, promise,
prospects. Annual Review of Animal Biosciences, 9,
265–288. https://doi.org/10.1146/annurev-animal-090120-115444
Pinzón, J. H., Kamel,
B., Burge, C. A., Harvell, C. D., Medina, M., Weil, E., & Mydlarz, L.
D. (2015). Whole transcriptome analysis reveals changes in expression of
immune-related genes during and after bleaching in a reef-building
coral. Royal Society Open Science, 2, 140214.
https://doi.org/10.1098/rsos.140214
Pradhan, S., Madke,
B., Kabra, P., & Singh, A. L. (2016). Anti-inflammatory and
immunomodulatory effects of antibiotics and their use in dermatology.Indian Journal of Dermatology, 61, 469–481.
https://doi.org/10.4103/0019-5154.190105
Precht, W. F.,
Gintert, B. E., Robbart, M. L., Fura, R., & Van Woesik, R. (2016).
Unprecedented disease-related coral mortality in Southeastern Florida.Scientific Reports, 6, 31374.
https://doi.org/10.1038/srep31374
R Core Team. (2019).
R: A language and environment for statistical computing. R
Foundation for Statistical Computing, Vienna, Austria.
https://www.r-project.org/
Rivas, N., Hesley, D.,
Kaufman, M., Unsworth, J., D’Alessandro, M., & Lirman, D. (2021).
Developing best practices for the restoration of massive corals and the
mitigation of predation impacts: Influences of physical protection,
colony size, and genotype on outplant mortality. Coral Reefs,40, 1227–1241. https://doi.org/10.1007/s00338-021-02127-5
Rosales, S. M., Clark,
A. S., Huebner, L. K., Ruzicka, R. R., & Muller, E. M. (2020).
Rhodobacterales and Rhizobiales are associated with stony coral tissue
loss disease and its suspected sources of transmission. Frontiers
in Microbiology, 11, 681.
https://doi.org/10.3389/fmicb.2020.00681
Rosales, S. M.,
Huebner, L. K., Clark, A. S., McMinds, R., Ruzicka, R. R., & Muller, E.
M. (2022). Bacterial metabolic potential and micro-eukaryotes enriched
in stony coral tissue loss disease lesions. Frontiers in Marine
Science, 8, 776859. https://doi.org/10.3389/fmars.2021.776859
Santoro, E. P.,
Borges, R. M., Espinoza, J. L., Freire, M., Messias, C. S. M. A.,
Villela, H. D. M., Pereira, L. M., Vilela, C. L. S., Rosado, J. G.,
Cardoso, P. M., Rosado, P. M., Assis, J. M., Duarte, G. A. S., Perna,
G., Rosado, A. S., Macrae, A., Dupont, C. L., Nelson, K. E., Sweet, M.
J., … Peixoto, R. S. (2021). Coral microbiome manipulation
elicits metabolic and genetic restructuring to mitigate heat stress and
evade mortality. Science Advances, 7, eabg3088.
https://doi.org/10.1126/sciadv.abg3088
Shilling, E. N.,
Combs, I. R., & Voss, J. D. (2021). Assessing the effectiveness of two
intervention methods for stony coral tissue loss disease onMontastraea cavernosa. Scientific Reports, 11,
8566. https://doi.org/10.1038/s41598-021-86926-4
Shoguchi, E.,
Beedessee, G., Hisata, K., Tada, I., Narisoko, H., Satoh, N., Kawachi,
M., & Shinzato, C. (2021). A new dinoflagellate genome illuminates a
conserved gene cluster involved in sunscreen biosynthesis. Genome
Biology and Evolution, 13, evaa235.
https://doi.org/10.1093/gbe/evaa235
Silva, D. P., Villela,
H. D. M., Santos, H. F., Duarte, G. A. S., Ribeiro, J. R., Ghizelini, A.
M., Vilela, C. L. S., Rosado, P. M., Fazolato, C. S., Santoro, E. P.,
Carmo, F. L., Ximenes, D. S., Soriano, A. U., Rachid, C. T. C. C., Vega
Thurber, R. L., & Peixoto, R. S. (2021). Multi-domain probiotic
consortium as an alternative to chemical remediation of oil spills at
coral reefs and adjacent sites. Microbiome, 9, 118.
https://doi.org/10.1186/s40168-021-01041-w
Studivan, M. S.
(2022a). Mstudiva/Mcav-Cladocopium-Annotated-Transcriptome:
Transcriptome annotations for Montastraea cavernosa andCladocopium spp. (Version 3.0). Zenodo.
https://doi.org/10.5281/zenodo.7007997
Studivan, M. S.
(2022b). Mstudiva/Ofav-Durusdinium-Annotated-Transcriptome:
Transcriptome annotations for Orbicella faveolata andDurusdinium spp. (Version 1.0). Zenodo.
https://doi.org/10.5281/zenodo.7007995
Studivan, M. S.
(2022c). mstudiva/SCTLD-intervention-transcriptomics: Stony coral tissue
loss disease transmission and antibiotic intervention transcriptomics
(Version 1.0). Zenodo. https://doi.org/10.5281/zenodo.7308500
Studivan, M. S.
(2022d). mstudiva/tag-based_RNAseq: RNA extraction and Tag-Seq library
preparation and analysis pipeline (Version 1.0). Zenodo.
https://doi.org/10.5281/zenodo.7007692
Studivan, M. S.,
Rossin, A. M., Rubin, E., Soderberg, N., Holstein, D. M., & Enochs, I.
C. (2022). Reef sediments can act as a stony coral tissue loss disease
vector. Frontiers in Marine Science, 8, 815698.
https://doi.org/10.3389/fmars.2021.815698
Sweet, M. J., Croquer,
A., & Bythell, J. C. (2011). Dynamics of bacterial community
development in the reef coral Acropora muricata following
experimental antibiotic treatment. Coral Reefs, 30,
1121–1133. https://doi.org/10.1007/s00338-011-0800-0
Sweet, M. J., Croquer,
A., & Bythell, J. C. (2014). Experimental antibiotic treatment
identifies potential pathogens of white band disease in the endangered
Caribbean coral Acropora cervicornis. Proceedings of the
Royal Society B: Biological Sciences, 281, 20140094.
https://doi.org/10.1098/rspb.2014.0094
Teplitski, M., &
Ritchie, K. (2009). How feasible is the biological control of coral
diseases? Trends in Ecology & Evolution, 24, 378–385.
https://doi.org/10.1016/j.tree.2009.02.008
Therneau, T. M.
(2021). Survival: A package for survival analysis in R. Rpackage version 3.2-13.
Thurber, R. V.,
Mydlarz, L. D., Brandt, M., Harvell, D., Weil, E., Raymundo, L., Willis,
B. L., Langevin, S., Tracy, A. M., Ritchie, K. B., Vega Thurber, R.,
Mydlarz, L. D., Brandt, M., Harvell, D., Weil, E., Raymundo, L., Willis,
B. L., Langevin, S., Tracy, A. M., … Lamb, J. (2020). Deciphering
coral disease dynamics: Integrating host, microbiome, and the changing
environment. Frontiers in Ecology and Evolution, 8,
575927. https://doi.org/10.3389/fevo.2020.575927
Traylor-Knowles, N.,
Baker, A. C., Beavers, K. M., Garg, N., Guyon, J. R., Hawthorn, A.,
MacKnight, N. J., Media, M., Mydlarz, L. D., Peters, E. C., Stewart, J.
M., Studivan, M. S., & Voss, J. D. (2022). Advances in immunity ’omics
in response to coral disease outbreaks. Frontiers in Marine
Science, 9, 952199. https://doi.org/10.3389/fmars.2022.952199
Traylor-Knowles, N.,
Connelly, M. T., Young, B. D., Eaton, K., Muller, E. M., Paul, V. J.,
Ushijima, B., DeMerlis, A., Drown, M. K., Goncalves, A., Kron, N.,
Snyder, G. A., Martin, C., & Rodriguez, K. (2021). Gene expression
response to stony coral tissue loss disease transmission in M.
cavernosa and O. faveolata from Florida. Frontiers in
Marine Science, 8, 681563.
https://doi.org/10.3389/fmars.2021.681563
Ushijima, B., Meyer,
J. L., Thompson, S., Pitts, K., Marusich, M. F., Tittl, J., Weatherup,
E., Reu, J., Wetzell, R., Aeby, G. S., Häse, C. C., & Paul, V. J.
(2020). Disease diagnostics and potential coinfections by Vibrio
coralliilyticus during an ongoing coral disease outbreak in Florida.Frontiers in Microbiology, 11, 2682.
https://doi.org/10.3389/fmicb.2020.569354
Veglia, A. J.,
Beavers, K., Buren, E. W. V., Meiling, S. S., Muller, E. M., Smith, T.
B., Holstein, D. M., Apprill, A., Brandt, M. E., Mydlarz, L. D., &
Correa, A. M. S. (2022). Alphaflexivirus genomes in stony coral tissue
loss disease-affected, disease-exposed, and disease-unexposed coral
colonies in the U.S. Virgin Islands. Microbiology Resource
Announcements, 11, e01199-21.
https://doi.org/10.1128/MRA.01199-21
Voolstra, C. R.,
Schwarz, J. A., Schnetzer, J., Sunagawa, S., Desalvo, M. K., Szmant, A.
M., Coffroth, M. A., & Medina, M. (2009). The host transcriptome
remains unaltered during the establishment of coral–algal symbioses.Molecular Ecology, 18, 1823–1833.
https://doi.org/10.1111/j.1365-294X.2009.04167.x
Walker, B. K., Turner,
N. R., Noren, H. K. G., Buckley, S. F., & Pitts, K. A. (2021).
Optimizing stony coral tissue loss disease (SCTLD) intervention
treatments on Montastraea cavernosa in an endemic zone.Frontiers in Marine Science, 8, 666224.
https://doi.org/10.3389/fmars.2021.666224
Walton, C. J., Hayes,
N. K., & Gilliam, D. S. (2018). Impacts of a regional, multi-year,
multi-species coral disease outbreak in Southeast Florida.Frontiers in Marine Science, 5, 323.
https://doi.org/10.3389/fmars.2018.00323
Wang, P., Bouwman, F.
G., & Mariman, E. C. M. (2009). Generally detected proteins in
comparative proteomics—A matter of cellular stress response?Proteomics, 9, 2955–2966.
https://doi.org/10.1002/pmic.200800826
Williams, L. M.,
Fuess, L. E., Brennan, J. J., Mansfield, K. M., Salas-Rodriguez, E.,
Welsh, J., Awtry, J., Banic, S., Chacko, C., Chezian, A., Dowers, D.,
Estrada, F., Hsieh, Y.-H., Kang, J., Li, W., Malchiodi, Z., Malinowski,
J., Matuszak, S., McTigue, T., … Gilmore, T. D. (2018). A
conserved Toll-like receptor-to-NF-κB signaling pathway in the
endangered coral Orbicella faveolata. Developmental &
Comparative Immunology, 79, 128–136.
https://doi.org/10.1016/j.dci.2017.10.016
Work, T. M.,
Weatherby, T. M., Landsberg, J. H., Kiryu, Y., Cook, S. M., & Peters,
E. C. (2021). Viral-like particles are associated with endosymbiont
pathology in Florida corals affected by stony coral tissue loss disease.Frontiers in Marine Science, 8, 750658.
https://doi.org/10.3389/fmars.2021.750658
Wright, R. M.,
Aglyamova, G. V., Meyer, E., & Matz, M. V. (2015). Gene expression
associated with white syndromes in a reef building coral, Acropora
hyacinthus. BMC Genomics, 16, 371.
https://doi.org/10.1186/s12864-015-1540-2
Young, B. D., Serrano,
X. M., Rosales, S. M., Miller, M. W., Williams, D., & Traylor-Knowles,
N. (2020). Innate immune gene expression in Acropora palmata is
consistent despite variance in yearly disease events. PLOS ONE,15, e0228514. https://doi.org/10.1371/journal.pone.0228514