Sample |
Input reads |
Filtered |
Denoised forward |
Denoised reverse |
Merged |
Non-chimeric |
Extraction blanks |
2.009 |
1.173 |
1.150 |
1.142 |
13 |
13 |
Stomach |
755.758 |
350.866 |
349.765 |
349.840 |
242.553 |
237.567 |
Cecum |
742.138 |
321.525 |
320.278 |
319.642 |
229.464 |
226.427 |
C1 |
548.838 |
283.847 |
283.023 |
282.946 |
213.947 |
204.749 |
C2 |
745.252 |
370.547 |
369.633 |
369.303 |
271.283 |
261.741 |
C3 |
634.524 |
324.615 |
323.596 |
323.317 |
226.881 |
224.844 |
C4 |
551.463 |
254.049 |
253.346 |
253.147 |
206.205 |
203.786 |
C5 |
559.460 |
272.415 |
271.609 |
271.402 |
159.567 |
158.241 |
C6 |
624.732 |
301.630 |
300.660 |
300.059 |
193.624 |
188.859 |
C7 |
670.502 |
313.308 |
311.935 |
311.397 |
214.056 |
205.772 |
C8 |
760.648 |
397.214 |
395.953 |
395.543 |
287.349 |
282.642 |
C9 |
731.646 |
367.289 |
365.790 |
365.438 |
275.122 |
269.431 |
C10 |
658.965 |
318.646 |
317.186 |
316.856 |
215.254 |
212.705 |
C11 |
702.488 |
340.687 |
339.058 |
338.399 |
224.913 |
219.703 |
C12 |
798.662 |
390.642 |
388.897 |
388.447 |
304.740 |
300.431 |
TOTAL |
9.487.085 |
4.608.453 |
4.591.879 |
4.586.878 |
3.264.971 |
3.196.911 |