Utilizing reporter genes and FACS-based screening is a straightforward and fast approach to accelerate the identification of high producer cell lines. The genetic regulatory elements such as ubiquitous chromatin-opening element (UCOE) could reduce the negative random insertional effect of the expression cassette and boost the gene of interest transcription level. Here, we used the combined strategy of FACS-based screening by green fluorescence intensity and UCOE to accelerate the clonal selection and enhance recombinant Darbepoetin alfa (DPO) productivity in Chinese Hamster Ovary (CHO) cells. In this way, two expression cassettes, pOptiVECTM and UCOE-containing plasmid, CET1019HD, which entailed codon optimized Darbepoetin alfa-LoxP-IRES-EGFP-LoxP-IRES-DHFR fragment, were designed. To achieve stable cell line, the cassettes were linearized and transfected to the CHO DG44 cells. After achieving stably transfected clones, EGFP was used as a selection marker in FCAS to enrich the cells with the brightest green fluorescent. In the Following, the DPO and EGFP expressions level were assessed through qRT-PCR, FCM, western blotting, and ELISA. Expression analysis revealed that all UCOE-containing cell pools indicated higher DPO yield compared to non-UCOE populations. Indeed, FACS sorting and enrichment of the UCOE-entailing cells leads to obtaining a clone with more than 8-fold productivity. Besides, isolating high-producing cells through FACS with a simple gate resulted in a 1.5-fold improvement of target protein concentration compared to the unsorted cells. According to the results, we suggest the EGFP-FACS-based screening for sorting high-producer recombinant cell lines in a reduced time and UCOE integrated strategy to enhance protein production dramatically.